Prediction of color can be important to breeders. We offer 8 tests: Agouti, Champagne, Cream gene, E Locus (red gene), Gray, Sabino, Silver Dapple (Z), and Tobiano. 

Agouti Gene
The A locus can be thought of as the gene that determines if a horse is bay or black, although other genes come into play. A horse that has at least one dominant "A" allele will be bay if it also possesses at least one "E" allele. A horse that is homozygous recessive for "a", that is "aa", will be black if it also possesses a "E" allele. All black horses are "EE or Ee and aa".

WHY TEST: If a horse is homozygous for "e", it will have a sorrel or chestnut base coat regardless of what genes it carries at the A locus. Thus a chestnut horse may be able to produce blacks if it carries an "a" allele and is bred to another horse carrying the "a" allele and a "E". If a person has a black horse and wants to know if a breeding to a chestnut horse will produce a black, the black horse needs to tested for the E locus and the chestnut horse needs to be tested for the A locus. A black horse that tests homozygous for "a" must also be homozygous for "E" to produce 100% blacks/bays/buckskins.

Champagne
We now offer the test for the mutation responsible for the Champagne factor in horses. The mutation was discovered here at the University of Kentucky. The Champagne gene is a dilution gene often confused with the Cream dilution gene. Unlike horses carrying a single Cream gene, Champagne horses have pink skin which becomes mottled in exposed areas such as the muzzle. Also Champagne foals are born with blue eyes that later darken to hazel or brown. A true black horse can mask the presence of the Cream gene, but a black horse carrying the Champagne gene is generally a chocolate color. There is no added effect if a horse carries two copies of the Champagne gene, whereas the homozygotes for the Cream gene create a more dilute horse with pink skin (cremellos and perlinos). Therefore the ability to test for the Champagne gene can distinguish homozygotes from heterozygotes, as well as more clearly determine the genotype of dilute pigmented horses.

Cream (Dilution) Gene
The cream gene, designated Cr, is a dominant dilution gene that causes a reduction in red pigment in the body hair and mane and tail hair. It acts on any base color- therefore a sorrel horse that inherits one copy of the Cr allele is palomino (ee, Cr/cr), a sorrel that inherits a Cr from each parent is Cr/Cr and is a cremello (ee, Cr/Cr). A bay horse that inherits a Cr allele from one parent is a buckskin (E/-, Cr/cr), while one that is homozygous for Cr is a perlino (ee, Cr/Cr). True black horses can mask the presence of the Cr gene, so it is possible for a black horse to produce palominos or buckskins. Cream is a different gene than Dun, which is also a dilution gene. In general, dun horses have a dorsal stripe.

WHY TEST: Owners of a black horse with a palomino or buckskin parent may want to determine if the horse carries an unexpressed Cr allele. Horses carrying the champagne gene may be confused with horses carrying the Cr gene-this test will verify if the horses indeed possess the Cr allele. It will also determine if a dun or gray horse may also possess a Cr allele.

DUN and NON-DUN1

Dun is a color pattern characterized by dilution of the base coat color as well as primitive markings such as a dorsal stripe, facial masking and barring on the legs. Dun is dominant and only one copy of the normal Dun locus at the TBX3 gene is required for the phenotype to be expressed. There is no dosage effect, so that horses exhibit the same phenotype whether they are heterozygous or homozygous for Dun. Dun is actually the ancestral coat color in horses, and horses that are not dun are the ones that have mutations, known as Non-Dun1 and Non-Dun2. Non-Dun1 horses have variations within the TBX3 gene that allow them to exhibit primitive markings without the coat color dilution. Non-Dun2 horses have a large deletion within the TBX3 gene, and thus do not have primitive markings or the coat color dilution. A black horse with Dun is called grullo or grulla, chestnut horses with Dun are called red or claybank duns, and bay horses with Dun are called yellow duns or simply dun.

WHY TEST: If an owner wishes to know if their horse is homozygous or heterozygous for Dun the Dun test alone is appropriate. This test does not distinguish between Non-Dun1 and Non-Dun2 if the horse is heterozygous for Dun or homozygous for Non-Dun. Dilute coat colors, such as palomino and perlino, may make it difficult to see primitive markings. If both the sire and dam of a horse are NOT dun, then the offspring cannot be dun. The Non-Dun1 test would be used in cases where a horse exhibits primitive markings but tests negative for dun or in cases where the owner wants to determine if their horse is a true dun or a Non-Dun1 horse on a different dilute coat color. The Non-Dun1 mutation can cause confusion, especially in a buckskin horse, because the horse may have a dorsal stripe and other primitive markings which would mimic Dun.

E locus (red gene) 
The Extension locus is another gene related to color, and determines whether a horse has black “points” as in the bay coat color pattern (the mane, tail, legs and tips of the ears are black). The allele responsible for this pattern is designated as E, the capital letter indicating it is dominant. The alternative allele, e, is recessive, and when a horse has two copies of this allele, as in ee, the horse lacks black pigment in the extremities, as in chestnut horses. For owners of a bay or black horse that want to know if that horse is homozygous for the Extension locus, and thus will always have offspring with black points, a DNA-based test is available.

Gray
Gray is caused by a dominant mutation, therefore a gray horse has at least one copy of the gray gene and must have at least one gray parent.  Gray causes a horse to progressively lighten as it ages, regardless of other color genes the horse possesses. The ultimate effect is that the horse will become totally white or flea-bitten gray. The skin remains black unless the horse has other genes that result in pink skin. The test we offer ONLY determines if the horse carries the Gray mutation, it cannot distinguish with confidence whether the horse carries one or two copies of the mutation.  The test is useful to determine if a horse will turn gray as it ages, or if the horse has such a dilute phenotype that it is difficult to determine if it also has the gray mutation.

Sabino
Sabino is a Paint color pattern that is variably expressed and can range from white stockings and a blaze to white leg and face markings and extensive white spreading up from the belly into the body area. The mutation we detect is indicative of the Sabino1 gene. Homozygous sabinos may have more extensive white than heterozygous horses. There is more than one sabino gene so that a horse that appears to have the sabino pattern may test negative for the Sabino1 gene. So far all horses that test positive for Sabino1 have the sabino pattern.

Silver Dapple (Z)
The Silver Dapple mutation results in a chocolate colored horse that has a lighter mane and tail.  It is most commonly found in pony breeds and gaited horse breeds such as the Rocky Mountain Horse. The mutation requires the presence of at least one E allele to be expressed. Therefore genetically black or bay horses alone express it if they carry one or two Z alleles. A chestnut horse (ee) may carry a Z allele, but there is no effect on color. It is thought that horses homozygous for the Z allele have a whiter mane and tail than the heterozygotes.

SPLASHED WHITE

We offer testing for the three most common Splashed White mutations, SW1, SW2 and SW3. SW2 is due to a mutation in the PAX3 gene and SW1 and SW3 are mutations that occur in the MITF gene. All of the mutations are dominant and cause variable white spotting patterns, which can include a wide blaze, belly spots, extensive white leg markings and blue eyes. Deafness can also occur and is most often associated with SW2. Extreme expression of Splashed White is often described as the horse looking like it was dipped in white paint, with the legs and abdomen being white while the upper half of the horse is dark. However, horses with a splashed white mutation can also have minimal markings. Horses can have combinations of the SW mutations and SW1 and SW2 homozygotes can occur. No SW3 homozygotes have been found and it is assumed that this is a lethal genotype.

WHY TEST: Breeders interested in producing white-patterned horses that want to increase their chances of producing horses with white-spotting. Horses carrying one or more of the SW mutations may produce additional white when crossed with horses carrying other white-spotting mutations such as

tobiano and frame overo (OLWS carriers). Breeders may also want to avoid matings where both the sire and dam have SW3, which can result in early pregnancy loss.

Tobiano 
The lab offers testing to determine homozygosity for the Tobiano (spotted) gene. Since the tobiano color pattern is valued and is dominant, horses that possess two copies of the gene (homozygous) are of special value to breeders, as ALL their offspring will inherit the tobiano color pattern. We no longer perform the serum protein test based on blood types due to its low reliability. Instead, Genetic Testing at Gluck is proud to offer the most reliable test for the Tobiano spotting pattern yet developed. Dr. Samantha Brooks, a former graduate student at UK's Department of Veterinary Science, discovered an inversion on chromosome 3 that appears to be 100% concordant with the presence of the tobiano pattern. This test replaces the former double marker test previously offered. Please be advised that Tobiano testing reports will reflect this change.